STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_04084STE20/SPS1-related proline-alanine-rich protein kinase. (436 aa)    
Predicted Functional Partners:
N306_05003
Translocation protein SEC62.
    
 
 0.993
N306_03826
Protein transport protein Sec61 subunit gamma.
   
 
 0.993
N306_03923
Translocation protein SEC63.
    
 
 0.912
N306_12903
Protein transport protein Sec61 subunit beta.
    
 
 0.907
N306_08376
Cyclin N-terminal domain-containing protein 1.
    
 
 0.900
N306_10828
Protein transport protein Sec61 subunit alpha isoform 1.
    
 
 0.887
N306_11544
Protein transport protein Sec61 subunit alpha isoform 2.
    
 
 0.887
N306_13124
5'-AMP-activated protein kinase subunit gamma-2.
     
 0.742
N306_06361
Calcium-binding protein 39.
   
 0.741
N306_06159
Calcium-binding protein 39-like.
   
 0.741
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.