STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_08038Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. (550 aa)    
Predicted Functional Partners:
N306_09586
Autophagy-related protein 101.
    
 0.998
N306_06499
Serine/threonine-protein kinase ULK1.
   
 0.996
N306_12394
RB1-inducible coiled-coil protein 1.
    
 0.990
N306_12083
Serine/threonine-protein kinase ULK2.
   
 0.984
N306_05161
Beclin 1-associated autophagy-related key regulator.
   
 0.934
N306_12200
Protein C9orf72.
    
 0.926
N306_13011
Phosphatidylinositol 3-kinase catalytic subunit type 3; Belongs to the PI3/PI4-kinase family.
    
 0.925
N306_05329
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
     
 0.900
N306_02226
Target of rapamycin complex subunit lst8.
     
 0.881
N306_02480
Nuclear receptor-binding factor 2.
     
 0.881
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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