Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
N306_00383 | N306_01658 | A0A091WE54 | A0A091W5I0 | Progesterone receptor. | Nuclear receptor coactivator 3. | 0.937 |
N306_00383 | N306_02456 | A0A091WE54 | A0A091W3X0 | Progesterone receptor. | Transcription factor AP-1; Belongs to the bZIP family. | 0.573 |
N306_00383 | N306_03692 | A0A091WE54 | A0A091W4K7 | Progesterone receptor. | Estrogen receptor. | 0.927 |
N306_00383 | N306_04837 | A0A091WE54 | A0A091VUI9 | Progesterone receptor. | Tyrosine-protein kinase. | 0.431 |
N306_00383 | N306_05678 | A0A091WE54 | A0A091VPK3 | Progesterone receptor. | Proto-oncogene tyrosine-protein kinase Src. | 0.431 |
N306_00383 | N306_06524 | A0A091WE54 | A0A091X444 | Progesterone receptor. | Nuclear receptor corepressor 2. | 0.850 |
N306_00383 | N306_07701 | A0A091WE54 | A0A091WC63 | Progesterone receptor. | Nuclear receptor-interacting protein 1. | 0.713 |
N306_00383 | N306_10029 | A0A091WE54 | A0A091WBS4 | Progesterone receptor. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.658 |
N306_00383 | N306_11345 | A0A091WE54 | A0A091WQ39 | Progesterone receptor. | Estrogen receptor beta. | 0.875 |
N306_00383 | N306_12064 | A0A091WE54 | A0A091VSN4 | Progesterone receptor. | Nuclear receptor corepressor 1. | 0.850 |
N306_01658 | N306_00383 | A0A091W5I0 | A0A091WE54 | Nuclear receptor coactivator 3. | Progesterone receptor. | 0.937 |
N306_01658 | N306_02456 | A0A091W5I0 | A0A091W3X0 | Nuclear receptor coactivator 3. | Transcription factor AP-1; Belongs to the bZIP family. | 0.882 |
N306_01658 | N306_03692 | A0A091W5I0 | A0A091W4K7 | Nuclear receptor coactivator 3. | Estrogen receptor. | 0.975 |
N306_01658 | N306_04837 | A0A091W5I0 | A0A091VUI9 | Nuclear receptor coactivator 3. | Tyrosine-protein kinase. | 0.772 |
N306_01658 | N306_05678 | A0A091W5I0 | A0A091VPK3 | Nuclear receptor coactivator 3. | Proto-oncogene tyrosine-protein kinase Src. | 0.772 |
N306_01658 | N306_06524 | A0A091W5I0 | A0A091X444 | Nuclear receptor coactivator 3. | Nuclear receptor corepressor 2. | 0.652 |
N306_01658 | N306_10029 | A0A091W5I0 | A0A091WBS4 | Nuclear receptor coactivator 3. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.866 |
N306_01658 | N306_11345 | A0A091W5I0 | A0A091WQ39 | Nuclear receptor coactivator 3. | Estrogen receptor beta. | 0.965 |
N306_01658 | N306_12064 | A0A091W5I0 | A0A091VSN4 | Nuclear receptor coactivator 3. | Nuclear receptor corepressor 1. | 0.652 |
N306_02456 | N306_00383 | A0A091W3X0 | A0A091WE54 | Transcription factor AP-1; Belongs to the bZIP family. | Progesterone receptor. | 0.573 |
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