STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_07698Zinc finger protein 143. (637 aa)    
Predicted Functional Partners:
N306_13089
Adenylate kinase 9.
    
  0.835
N306_13090
Adenylate kinase 9.
 
  
  0.835
N306_15237
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
     
 0.672
N306_01541
POU domain protein.
    
  0.647
N306_10348
POU domain protein.
 
  
  0.636
N306_03276
DNA-directed RNA polymerase III subunit RPC3.
    
  0.635
N306_03093
Transcription initiation factor IIB.
   
 0.620
N306_02199
TATA-box-binding protein.
    
 0.619
N306_05160
TATA-box-binding protein.
    
 0.619
N306_12742
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
    
 0.616
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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