STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_09561Collagen alpha-1(XI) chain. (1789 aa)    
Predicted Functional Partners:
N306_03148
Collagen alpha-2(IV) chain.
 
  
  0.829
N306_07961
Procollagen C-endopeptidase enhancer 2.
   
 0.572
N306_13464
Collagen alpha-2(VI) chain.
   
0.551
N306_14068
Complement C1q subcomponent subunit C.
    
 
0.505
N306_00795
Integrin beta.
    
 0.498
N306_15515
Integrin alpha-1; Belongs to the integrin alpha chain family.
    
 0.498
N306_04112
Integrin beta.
    
 0.485
N306_01482
Integrin beta.
    
 0.485
N306_03188
Integrin alpha-V; Belongs to the integrin alpha chain family.
   
 0.483
N306_12603
Integrin alpha-8; Belongs to the integrin alpha chain family.
    
 0.477
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.