STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_07836CCR4-NOT transcription complex subunit 11. (340 aa)    
Predicted Functional Partners:
N306_07475
CCR4-NOT transcription complex subunit 10.
    
 0.999
N306_14052
Cell differentiation protein RCD1.
    
 0.983
N306_04360
CCR4-NOT transcription complex subunit 2.
    
 0.969
N306_04266
CCR4-NOT transcription complex subunit 4.
     
 0.957
N306_00534
CCR4-NOT transcription complex subunit 7.
    
 0.928
N306_03599
CCR4-NOT transcription complex subunit 8.
    
 0.909
N306_10978
Gametogenetin-binding protein 2.
    
   0.826
N306_11942
CCR4-NOT transcription complex subunit 6.
    
 0.812
N306_13364
CCR4-NOT transcription complex subunit 6-like.
    
 0.812
N306_12376
Protein Tob1.
    
 0.779
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.