STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_05269Programmed cell death 1 ligand 1. (223 aa)    
Predicted Functional Partners:
N306_14120
Programmed cell death protein 1.
   
 0.995
N306_01527
T-lymphocyte activation antigen CD80.
   
 0.995
N306_09841
HERV-H LTR-associating protein 2.
     
 0.818
N306_07941
Tyrosine-protein phosphatase non-receptor type 11.
   
 0.770
N306_14173
T-cell surface glycoprotein CD4.
     
 0.710
N306_14164
Tyrosine-protein phosphatase non-receptor type 6.
   
 0.644
N306_01542
T-cell surface glycoprotein CD3 zeta chain.
     
 0.644
N306_10171
Cytotoxic T-lymphocyte protein 4.
    
 
 0.623
N306_01210
Ig heavy chain V-III region VH26.
   
 0.616
N306_07209
Ig heavy chain V-II region HE.
   
 0.616
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.