STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_030052',3'-cyclic-nucleotide 3'-phosphodiesterase. (426 aa)    
Predicted Functional Partners:
N306_03006
Tetratricopeptide repeat protein 25.
 
  
   0.804
N306_04191
Partner and localizer of BRCA2.
    
  0.710
N306_07395
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6; Belongs to the complex I LYR family.
   
   0.636
N306_08350
zf-CHCC domain-containing protein.
   
   0.631
N306_06979
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5.
   
   0.627
N306_04226
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
   0.617
N306_03208
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9; Belongs to the complex I LYR family.
    
   0.600
N306_08016
Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.
    
 
 0.594
N306_03237
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8.
   
   0.592
N306_09829
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10.
    
   0.589
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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