STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_12168rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (351 aa)    
Predicted Functional Partners:
N306_06779
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
   
 0.969
N306_13197
Bystin.
   
 
 0.894
N306_13592
Aurora kinase A-interacting protein.
    
 
 0.852
N306_10185
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
 
 
    0.851
N306_10481
Pre-rRNA-processing protein TSR1.
   
 
 0.796
N306_09974
WD repeat-containing protein 36.
   
   0.793
N306_09187
Periodic tryptophan protein 2.
   
 
 0.792
N306_13763
Ribosomal_S7 domain-containing protein.
  
 
 0.792
N306_14708
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.792
N306_03425
RNA-binding protein NOB1.
   
 
 0.788
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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