STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_14197Aspartate--tRNA ligase, cytoplasmic. (460 aa)    
Predicted Functional Partners:
N306_11589
Bifunctional glutamate/proline--tRNA ligase.
  
 0.999
N306_02813
GatB_Yqey domain-containing protein.
 
 0.990
N306_13335
Tyrosine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.975
N306_14600
Aminoacyl tRNA synthase complex-interacting multifunctional protein 2.
   
 0.970
N306_10620
Eukaryotic translation elongation factor 1 epsilon-1.
   
 0.952
N306_13211
Isoleucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.943
N306_11049
Arginine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.924
N306_00999
Aminoacyl tRNA synthase complex-interacting multifunctional protein 1.
  
 0.918
N306_01374
AA_TRNA_LIGASE_II domain-containing protein.
  
0.901
N306_03929
Amidase domain-containing protein.
  
 0.893
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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