STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_02349Ubiquitin-like 3. (109 aa)    
Predicted Functional Partners:
N306_04588
Protein unc-79.
      
 0.499
N306_13041
DNA-binding protein SATB2.
      
 0.493
N306_12404
Lipoxygenase homology domain-containing protein 1.
    
 
 0.467
N306_06919
Protein FAM150B.
      
 0.465
N306_11822
Small ubiquitin-related modifier.
      
 0.465
N306_03933
Autophagy protein 5; Involved in autophagic vesicle formation.
      
 0.463
N306_02413
BTB/POZ domain-containing protein 9.
      
 0.463
N306_09891
Autophagy-related protein 3.
      
 0.461
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.