STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_09950Histone deacetylase complex subunit SAP30. (114 aa)    
Predicted Functional Partners:
N306_03943
AT-rich interactive domain-containing protein 4A.
    
 0.993
N306_10894
Paired amphipathic helix protein Sin3a.
    
 0.903
N306_10573
Breast cancer metastasis-suppressor 1-like.
   
 0.871
N306_00581
Paired amphipathic helix protein Sin3b.
    
 0.869
N306_04045
Corepressor interacting with RBPJ 1.
    
 0.818
N306_09126
Histone deacetylase complex subunit SAP18.
     
 0.793
N306_05574
Histone-binding protein RBBP4.
    
 0.791
N306_05560
Histone deacetylase 1.
    
 0.764
N306_00283
Histone deacetylase 2.
    
 0.764
N306_08558
Histone deacetylase 8.
    
 0.764
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.