STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_02209Pumilio 2. (1046 aa)    
Predicted Functional Partners:
N306_11056
Cyclin-G-associated kinase.
   
 0.983
N306_02735
Ectodysplasin-A receptor-associated adapter protein.
   
 
 0.970
N306_05960
Ataxin-1-like.
     
 0.828
N306_13335
Tyrosine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
 
 0.785
N306_00534
CCR4-NOT transcription complex subunit 7.
    
 
 0.776
N306_03599
CCR4-NOT transcription complex subunit 8.
    
 
 0.776
N306_03582
Clathrin interactor 1.
   
 
 0.709
N306_02298
Uncharacterized protein.
    
  0.684
N306_02299
Protein phosphatase 1 regulatory subunit 26.
    
  0.684
N306_02865
Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.
   
 
 0.681
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.