STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_12908Partitioning defective 6 gamma. (282 aa)    
Predicted Functional Partners:
N306_14063
Cell division control protein 42.
    
 0.956
N306_09500
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.949
N306_05006
Protein kinase C iota type; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
    
 0.949
N306_10784
MAGUK p55 subfamily member 5; Belongs to the MAGUK family.
    
0.902
N306_10709
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3.
    
 0.898
N306_01673
Partitioning defective 6 beta.
  
  
 
0.824
N306_10658
Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.
    
  0.799
N306_10165
Partitioning defective 3 B.
    
 0.776
N306_10167
Partitioning defective 3 B.
    
 0.776
N306_10169
Partitioning defective 3 B.
    
 0.776
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.