STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_04231Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (441 aa)    
Predicted Functional Partners:
N306_07043
60S ribosomal protein L5.
  
 
 0.929
N306_14459
60S ribosomal protein L35.
  
 
 0.927
N306_11863
Nucleotide exchange factor SIL1.
  
 
 0.918
N306_01085
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
   0.916
N306_13915
60S ribosomal protein L26.
  
   0.912
N306_01098
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.912
N306_10495
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.911
N306_12529
60S acidic ribosomal protein P0.
  
 
 0.910
N306_02866
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 0.901
N306_04628
Sphingolipid delta(4)-desaturase/C4-hydroxylase DES2.
 
    
 0.896
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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