STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_06414Nuclear transcription factor Y subunit beta. (169 aa)    
Predicted Functional Partners:
N306_01148
Nuclear transcription factor Y subunit alpha.
   
 0.999
N306_05140
Nuclear transcription factor Y subunit gamma.
   
 0.999
N306_10928
Chromatin accessibility complex protein 1.
   
 0.974
N306_11556
GATA-binding factor 3.
    
 
 0.784
N306_05517
MHC class II transactivator.
     
 0.746
N306_05518
MHC class II transactivator.
     
 0.746
N306_01837
DNA polymerase epsilon subunit 2.
     
 0.712
N306_12260
Transcription factor GATA-6.
    
 
 0.665
N306_02546
Zinc finger transcription factor Trps1.
    
 
 0.665
N306_06832
Uncharacterized protein.
    
 
 0.665
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.