STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_03332Lariat debranching enzyme. (433 aa)    
Predicted Functional Partners:
N306_08910
Exportin-5.
   
  
 0.554
N306_11531
Pre-mRNA-splicing factor 18.
    
 
 0.540
N306_13284
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
    
 
 0.510
N306_04908
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32.
    
 
 0.510
N306_04148
Ribonuclease 3.
      
 0.499
N306_10679
U1 small nuclear ribonucleoprotein C.
      
 0.479
N306_00418
CWF19-like 2.
   
  
 0.478
N306_04602
Endoribonuclease Dicer; Belongs to the helicase family. Dicer subfamily.
      
 0.465
N306_14590
Methyltransferase-like 9.
 
      0.453
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.