STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_04722Mitochondrial ubiquitin ligase activator of NFKB 1. (242 aa)    
Predicted Functional Partners:
N306_03293
UBX domain-containing protein 7.
    
  0.981
N306_08124
Mitochondrial ubiquitin ligase activator of nfkb 1-A.
 
      0.899
N306_02099
Ubiquitin carboxyl-terminal hydrolase.
     
 0.688
N306_01566
Ubiquitin-conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.605
N306_09373
Ubiquitin-conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.605
N306_02888
Ubiquitin-conjugating enzyme E2 D3; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.605
N306_03660
Ubiquitin-40S ribosomal protein S27a.
    
  0.578
N306_14458
Nuclear receptor subfamily 6 group A member 1.
    
 
 0.570
N306_08632
Mitochondrial Rho GTPase 1.
     
 0.557
N306_09867
Mitochondrial import receptor subunit TOM70.
     
 0.557
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.