STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_02718UPF0547 protein C16orf87. (133 aa)    
Predicted Functional Partners:
N306_02485
AT-rich interactive domain-containing protein 5B.
    
 
 0.618
N306_15543
Mesoderm induction early response protein 3.
    
   0.588
N306_06261
Mesoderm induction early response protein 1.
    
   0.541
N306_13277
Anaphase-promoting complex subunit 4.
    
   0.506
N306_05054
Anaphase-promoting complex subunit 2; Belongs to the cullin family.
    
   0.504
N306_03476
Anaphase-promoting complex subunit 7.
    
   0.432
N306_09387
Anaphase-promoting complex subunit 16.
    
   0.403
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.