STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_10321Carnitine O-palmitoyltransferase 1, liver isoform; Belongs to the carnitine/choline acetyltransferase family. (770 aa)    
Predicted Functional Partners:
N306_07087
Long-chain-fatty-acid--CoA ligase 4.
   
 
 0.881
N306_03421
Long-chain-fatty-acid--CoA ligase 5.
     
 0.880
N306_14100
Long-chain-fatty-acid--CoA ligase 3.
   
 
 0.880
N306_02112
Long-chain-fatty-acid--CoA ligase 6.
     
 0.879
N306_07527
Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.
  
 
0.863
N306_15256
Long-chain-fatty-acid--CoA ligase ACSBG1.
     
 0.839
N306_01246
Long-chain-fatty-acid--CoA ligase ACSBG2.
     
 0.839
N306_10983
Acetyl-CoA carboxylase.
     
 0.789
N306_02102
Acetyl-CoA carboxylase 2.
     
 0.789
N306_14401
Uncharacterized protein.
     
 0.773
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.