STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_06385E3 ubiquitin-protein ligase RNF216. (931 aa)    
Predicted Functional Partners:
N306_03660
Ubiquitin-40S ribosomal protein S27a.
   
 0.903
N306_12067
Ubiquitin-40S ribosomal protein S27a.
    
  0.896
N306_08922
Baculoviral IAP repeat-containing protein 6.
    
 0.804
N306_14014
Ubiquitin carboxyl-terminal hydrolase CYLD.
    
 0.793
N306_05864
Ubiquitin thioesterase otulin.
    
 0.750
N306_05865
Inactive ubiquitin thioesterase FAM105A.
    
 0.750
N306_06594
RBR-type E3 ubiquitin transferase.
    
 0.742
N306_05641
RBR-type E3 ubiquitin transferase.
    
0.717
N306_00782
Receptor-interacting serine/threonine-protein kinase 1.
    
 0.714
N306_09135
Sacsin.
    
 0.703
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.