STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_08393Ras-related protein Rab-18-B. (169 aa)    
Predicted Functional Partners:
N306_14191
Rab3 GTPase-activating protein catalytic subunit.
    
 0.761
N306_08313
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.753
N306_11586
Rab3 GTPase-activating protein non-catalytic subunit.
     
 0.729
N306_02817
40S ribosomal protein S3a.
 
      0.723
N306_02623
Protein prenyltransferase alpha subunit repeat-containing protein 1.
    
 0.646
N306_07059
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
     
 0.622
N306_04768
DnaJ subfamily C member 27.
   
0.613
N306_01197
Ras-related protein Rab-6A.
  
 
0.601
N306_04875
Ras-related protein Rab-36.
  
 
0.600
N306_01778
Ras-related protein Rab-6A.
  
 
0.599
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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