STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_01474Tripartite motif-containing protein 65. (45 aa)    
Predicted Functional Partners:
N306_13165
Putative ATP-dependent RNA helicase DDX58.
   
 0.916
N306_04104
Interferon-induced helicase C domain-containing protein 1.
   
 0.788
N306_03660
Ubiquitin-40S ribosomal protein S27a.
    
  0.775
N306_10170
Inducible T-cell costimulator.
    
 0.574
N306_11993
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
  0.564
N306_07691
Replication factor C subunit 5.
    
  0.558
N306_08928
Interferon-induced, double-stranded RNA-activated protein kinase; Belongs to the protein kinase superfamily.
   
 0.555
N306_01372
2-5A-dependent ribonuclease.
    
 0.552
N306_13427
Replication factor C subunit 1.
    
  0.547
N306_08460
Replication factor C subunit 2.
    
  0.547
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.