STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_15455LMBR1 domain-containing protein 2. (688 aa)    
Predicted Functional Partners:
N306_15454
Calcyphosin-like.
 
 
  
 0.681
N306_15393
ESF1.
      
 0.481
N306_12972
RNA-binding E3 ubiquitin-protein ligase MEX3C.
   
  
 0.470
N306_15286
Protein FAM214A.
      
 0.463
N306_15552
DEP domain-containing protein 1B.
      
 0.448
N306_13915
60S ribosomal protein L26.
 
      0.410
N306_05959
AP-1 complex subunit gamma.
   
  
 0.408
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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