STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_09484Microtubule-associated proteins 1A/1B light chain 3C. (107 aa)    
Predicted Functional Partners:
N306_09891
Autophagy-related protein 3.
   
 0.878
N306_03286
Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.
   
 0.864
N306_07082
Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.
   
 0.820
N306_02440
Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.
   
 0.817
N306_12485
Calcium-binding and coiled-coil domain-containing protein 2.
    
 0.815
N306_11954
Sequestosome-1.
   
 0.808
N306_05161
Beclin 1-associated autophagy-related key regulator.
    
 0.800
N306_11491
Gamma-secretase-activating protein.
   
 0.785
N306_03933
Autophagy protein 5; Involved in autophagic vesicle formation.
   
 0.758
N306_12083
Serine/threonine-protein kinase ULK2.
   
 0.754
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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