STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_12261DNA endonuclease RBBP8. (905 aa)    
Predicted Functional Partners:
N306_08845
Nibrin.
    
 0.983
N306_00124
Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family.
   
 0.976
N306_02120
DNA repair protein RAD50.
    
 0.971
N306_04945
Putative ankyrin repeat domain-containing protein 31.
    
 0.962
N306_10995
Exonuclease 1.
   
 0.916
N306_06637
Bifunctional epoxide hydrolase 2.
   
 0.867
N306_14246
N-acetylserotonin O-methyltransferase-like.
     
 0.866
N306_04191
Partner and localizer of BRCA2.
  
 0.837
N306_03457
DNA replication ATP-dependent helicase/nuclease DNA2.
    
 0.825
N306_10095
NAD-dependent protein deacetylase sirtuin-6.
   
 0.816
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.