N306_11299 protein (Opisthocomus hoazin) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

N306_11299

Tyrosine-protein kinase. (534 aa)

Predicted Functional Partners:

N306_04837

0.912

N306_10359

0.891

N306_10930

0.887

N306_00371

0.873

N306_00646

0.863

N306_06478

0.860

N306_15130

0.858

N306_12412

0.848

N306_01542

0.845

N306_07435

0.837

Your Current Organism:

Opisthocomus hoazin

NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N306_00371	N306_00646	A0A091W6S5	A0A091WRZ5	Catenin beta-1.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.768
N306_00371	N306_04837	A0A091W6S5	A0A091VUI9	Catenin beta-1.	Tyrosine-protein kinase.	0.844
N306_00371	N306_06478	A0A091W6S5	A0A091VYG6	Catenin beta-1.	Armadillo repeat protein deleted in velo-cardio-facial syndrome.	0.914
N306_00371	N306_10359	A0A091W6S5	A0A091WP85	Catenin beta-1.	E3 ubiquitin-protein ligase CBL.	0.475
N306_00371	N306_11299	A0A091W6S5	A0A091XK84	Catenin beta-1.	Tyrosine-protein kinase.	0.873
N306_00371	N306_12412	A0A091W6S5	A0A091WCC3	Catenin beta-1.	Tyrosine-protein kinase.	0.639
N306_00371	N306_15130	A0A091W6S5	A0A091W8L8	Catenin beta-1.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.762
N306_00646	N306_00371	A0A091WRZ5	A0A091W6S5	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Catenin beta-1.	0.768
N306_00646	N306_04837	A0A091WRZ5	A0A091VUI9	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Tyrosine-protein kinase.	0.853
N306_00646	N306_11299	A0A091WRZ5	A0A091XK84	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Tyrosine-protein kinase.	0.863
N306_00646	N306_12412	A0A091WRZ5	A0A091WCC3	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Tyrosine-protein kinase.	0.678
N306_00646	N306_15130	A0A091WRZ5	A0A091W8L8	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.927
N306_01542	N306_04837	A0A091WR21	A0A091VUI9	T-cell surface glycoprotein CD3 zeta chain.	Tyrosine-protein kinase.	0.643
N306_01542	N306_07435	A0A091WR21	A0A091W9W5	T-cell surface glycoprotein CD3 zeta chain.	SHC-transforming protein 3.	0.808
N306_01542	N306_11299	A0A091WR21	A0A091XK84	T-cell surface glycoprotein CD3 zeta chain.	Tyrosine-protein kinase.	0.845
N306_01542	N306_12412	A0A091WR21	A0A091WCC3	T-cell surface glycoprotein CD3 zeta chain.	Tyrosine-protein kinase.	0.676
N306_04837	N306_00371	A0A091VUI9	A0A091W6S5	Tyrosine-protein kinase.	Catenin beta-1.	0.844
N306_04837	N306_00646	A0A091VUI9	A0A091WRZ5	Tyrosine-protein kinase.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.853
N306_04837	N306_01542	A0A091VUI9	A0A091WR21	Tyrosine-protein kinase.	T-cell surface glycoprotein CD3 zeta chain.	0.643
N306_04837	N306_06478	A0A091VUI9	A0A091VYG6	Tyrosine-protein kinase.	Armadillo repeat protein deleted in velo-cardio-facial syndrome.	0.863