STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_10532Exosome complex component RRP42. (272 aa)    
Predicted Functional Partners:
N306_04442
Exosome complex component RRP45.
  
0.999
N306_14770
Exosome complex component RRP4.
   
 0.999
N306_13695
Exosome complex component RRP40.
  
 0.999
N306_05330
Exosome component 10.
   
 0.998
N306_08817
Exosome complex exonuclease RRP44; Belongs to the RNR ribonuclease family.
   
 0.997
N306_15531
Superkiller viralicidic activity 2-like 2.
   
 0.994
N306_14936
HBS1-like.
    
 0.991
N306_03876
DIS3-like exonuclease 1; Belongs to the RNR ribonuclease family.
   
 0.988
N306_13258
Nuclear nucleic acid-binding protein C1D.
   
 0.988
N306_05908
M-phase phosphoprotein 6.
    
 0.981
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.