STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002019645_02027Unannotated protein. (438 aa)    
Predicted Functional Partners:
GCA_002019645_00352
Unannotated protein.
    
 0.779
GCA_002019645_00003
Unannotated protein.
    
  0.746
GCA_002019645_04868
Unannotated protein.
    
  0.636
GCA_002019645_02108
Unannotated protein.
    
  0.616
GCA_002019645_00564
Unannotated protein.
    
 0.600
GCA_002019645_00310
Unannotated protein.
  
  
  0.584
GCA_002019645_02026
Unannotated protein.
       0.580
GCA_002019645_00389
Unannotated protein.
    
  0.577
GCA_002019645_02295
Unannotated protein.
 
  
  0.556
GCA_002019645_04945
Unannotated protein.
  
     0.549
Your Current Organism:
Bacillus alkalitelluris
NCBI taxonomy Id: 304268
Other names: B. alkalitelluris, Bacillus alkalitelluris Lee et al. 2008, Bacillus sp. BA288, DSM 16976, KCTC 3947, strain BA288
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.