STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002019645_02160Unannotated protein. (228 aa)    
Predicted Functional Partners:
GCA_002019645_02161
Unannotated protein.
 
 
 0.999
GCA_002019645_02159
Unannotated protein.
 
  
 0.952
GCA_002019645_02158
Unannotated protein.
  
  
 0.946
GCA_002019645_03344
Unannotated protein.
   
 
 0.821
GCA_002019645_00041
Unannotated protein.
   
 
 0.806
GCA_002019645_05006
Unannotated protein.
   
 
 0.798
GCA_002019645_02157
Unannotated protein.
  
  
 0.756
GCA_002019645_00958
Unannotated protein.
  
   
 0.715
GCA_002019645_03287
Unannotated protein.
  
  
 0.580
GCA_002019645_03240
Unannotated protein.
  
   
 0.577
Your Current Organism:
Bacillus alkalitelluris
NCBI taxonomy Id: 304268
Other names: B. alkalitelluris, Bacillus alkalitelluris Lee et al. 2008, Bacillus sp. BA288, DSM 16976, KCTC 3947, strain BA288
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.