STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002019645_03232Unannotated protein. (177 aa)    
Predicted Functional Partners:
GCA_002019645_03233
Unannotated protein.
 
     0.836
GCA_002019645_03258
Unannotated protein.
 
    0.766
GCA_002019645_01959
Unannotated protein.
  
     0.734
GCA_002019645_03247
Unannotated protein.
 
  
 0.704
GCA_002019645_03234
Unannotated protein.
  
    0.701
GCA_002019645_03257
Unannotated protein.
 
    0.631
GCA_002019645_01841
Unannotated protein.
  
     0.606
GCA_002019645_04329
Unannotated protein.
  
     0.599
GCA_002019645_03251
Unannotated protein.
 
    0.597
GCA_002019645_03256
Unannotated protein.
 
    0.595
Your Current Organism:
Bacillus alkalitelluris
NCBI taxonomy Id: 304268
Other names: B. alkalitelluris, Bacillus alkalitelluris Lee et al. 2008, Bacillus sp. BA288, DSM 16976, KCTC 3947, strain BA288
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.