STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002019645_03628Unannotated protein. (480 aa)    
Predicted Functional Partners:
GCA_002019645_01989
Unannotated protein.
   
    0.626
GCA_002019645_03626
Unannotated protein.
 
   
 0.534
GCA_002019645_03627
Unannotated protein.
 
   
 0.532
GCA_002019645_01127
Unannotated protein.
   
    0.476
GCA_002019645_04809
Unannotated protein.
  
    0.451
GCA_002019645_04968
Unannotated protein.
  
    0.451
GCA_002019645_04969
Unannotated protein.
  
    0.451
GCA_002019645_05108
Unannotated protein.
  
    0.451
GCA_002019645_01165
Unannotated protein.
  
    0.416
GCA_002019645_00534
Unannotated protein.
   
    0.403
Your Current Organism:
Bacillus alkalitelluris
NCBI taxonomy Id: 304268
Other names: B. alkalitelluris, Bacillus alkalitelluris Lee et al. 2008, Bacillus sp. BA288, DSM 16976, KCTC 3947, strain BA288
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.