MCP_0034 protein (Methanocella paludicola) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

MCP_0034

Putative histidine kinase; Contains at least two PAS domains (IPR000014); Contains two PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).; Contains two PAC motif repeats (IPR001610). (636 aa)

Predicted Functional Partners:

MCP_2616

0.872

MCP_0035

0.550

MCP_0444

0.546

MCP_2581

0.534

MCP_0036

0.532

MCP_1444

0.484

MCP_2253

0.468

MCP_1768

0.458

MCP_1650

0.441

Your Current Organism:

Methanocella paludicola

NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
MCP_0034	MCP_0035	Putative histidine kinase; Contains at least two PAS domains (IPR000014); Contains two PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).; Contains two PAC motif repeats (IPR001610).	Conserved hypothetical protein; Similar to Putative general stress protein B in uncultured methanogenic archaeon (Q0W564).	0.550
MCP_0034	MCP_0036	Putative histidine kinase; Contains at least two PAS domains (IPR000014); Contains two PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).; Contains two PAC motif repeats (IPR001610).	Hypothetical protein.	0.532
MCP_0034	MCP_0444	Putative histidine kinase; Contains at least two PAS domains (IPR000014); Contains two PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).; Contains two PAC motif repeats (IPR001610).	Aldo/keto reductase family protein.	0.546
MCP_0034	MCP_1444	Putative histidine kinase; Contains at least two PAS domains (IPR000014); Contains two PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).; Contains two PAC motif repeats (IPR001610).	Putative MCP methyltransferase.	0.484
MCP_0034	MCP_1650	Putative histidine kinase; Contains at least two PAS domains (IPR000014); Contains two PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).; Contains two PAC motif repeats (IPR001610).	Putative response regulator.	0.441
MCP_0034	MCP_1768	Putative histidine kinase; Contains at least two PAS domains (IPR000014); Contains two PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).; Contains two PAC motif repeats (IPR001610).	Putative signaling protein; Contains two PAS domains (IPR000014); Contains two PAS-associated, C-terminal domains (IPR000700).	0.458
MCP_0034	MCP_2253	Putative histidine kinase; Contains at least two PAS domains (IPR000014); Contains two PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).; Contains two PAC motif repeats (IPR001610).	Putative signaling protein; Contains one PAS domain (IPR000014); Contains one PAS-associated, C-terminal domain (IPR000700).; Contains PAC motif repeats (IPR001610).	0.468
MCP_0034	MCP_2581	Putative histidine kinase; Contains at least two PAS domains (IPR000014); Contains two PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).; Contains two PAC motif repeats (IPR001610).	Putative response regulator.	0.534
MCP_0034	MCP_2616	Putative histidine kinase; Contains at least two PAS domains (IPR000014); Contains two PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).; Contains two PAC motif repeats (IPR001610).	Putative histidine kinase; Contains at least one GAF domain (IPR003018); Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).	0.872
MCP_0035	MCP_0034	Conserved hypothetical protein; Similar to Putative general stress protein B in uncultured methanogenic archaeon (Q0W564).	Putative histidine kinase; Contains at least two PAS domains (IPR000014); Contains two PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).; Contains two PAC motif repeats (IPR001610).	0.550
MCP_0035	MCP_0036	Conserved hypothetical protein; Similar to Putative general stress protein B in uncultured methanogenic archaeon (Q0W564).	Hypothetical protein.	0.746
MCP_0036	MCP_0034	Hypothetical protein.	Putative histidine kinase; Contains at least two PAS domains (IPR000014); Contains two PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).; Contains two PAC motif repeats (IPR001610).	0.532
MCP_0036	MCP_0035	Hypothetical protein.	Conserved hypothetical protein; Similar to Putative general stress protein B in uncultured methanogenic archaeon (Q0W564).	0.746
MCP_0444	MCP_0034	Aldo/keto reductase family protein.	Putative histidine kinase; Contains at least two PAS domains (IPR000014); Contains two PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).; Contains two PAC motif repeats (IPR001610).	0.546
MCP_0444	MCP_1444	Aldo/keto reductase family protein.	Putative MCP methyltransferase.	0.546
MCP_1444	MCP_0034	Putative MCP methyltransferase.	Putative histidine kinase; Contains at least two PAS domains (IPR000014); Contains two PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).; Contains two PAC motif repeats (IPR001610).	0.484
MCP_1444	MCP_0444	Putative MCP methyltransferase.	Aldo/keto reductase family protein.	0.546
MCP_1444	MCP_1768	Putative MCP methyltransferase.	Putative signaling protein; Contains two PAS domains (IPR000014); Contains two PAS-associated, C-terminal domains (IPR000700).	0.940
MCP_1444	MCP_2253	Putative MCP methyltransferase.	Putative signaling protein; Contains one PAS domain (IPR000014); Contains one PAS-associated, C-terminal domain (IPR000700).; Contains PAC motif repeats (IPR001610).	0.737
MCP_1444	MCP_2616	Putative MCP methyltransferase.	Putative histidine kinase; Contains at least one GAF domain (IPR003018); Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).	0.900

page 1 of 2

Server load: medium (56%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Co-occurrence

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About