STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_0053Hypothetical protein. (313 aa)    
Predicted Functional Partners:
MCP_2734
Conserved hypothetical protein.
  
     0.464
MCP_0444
Aldo/keto reductase family protein.
    
 0.463
MCP_0329
Putative transcriptional regulator.
  
     0.454
MCP_0052
Putative histidine kinase; Contains four PAS domains (IPR000014); Contains four PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains four PAC motif repeats (IPR001610).
 
    
0.444
MCP_1826
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF211 family (IPR003831).
  
     0.405
MCP_2586
Conserved hypothetical protein; Contains one Bacterio-opsin activator, HTHdomain (IPR007050).
  
     0.400
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.