STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
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[Homology]
Score
MCP_0072Putative metal-dependent phosphohydrolase. (214 aa)    
Predicted Functional Partners:
MCP_0073
Conserved hypothetical protein; Contains one Metallophosphoesterase domain (IPR004843).
  
    0.734
MCP_0026
Putative haloacid dehalogenase.
 
     0.616
MCP_0074
Conserved hypothetical protein.
       0.610
MCP_2154
Amidohydrolase family protein.
       0.576
MCP_2267
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF137 family (IPR002855).
       0.558
MCP_0043
Conserved hypothetical protein; Belongs to the Sjogrens syndrome scleroderma autoantigen 1family (IPR009563).
       0.536
aspS
aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn).
       0.536
MCP_1376
Putative TrmB family transcriptional regulator.
       0.530
pycA
Putative pyruvate carboxylase subunit A.
       0.529
MCP_0861
Similar to 3-hexulose-6-phosphate synthase in Methanosarcina barkeri (Q46DA4).
       0.529
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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