STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_0190Conserved hypothetical protein; Belongs to the Protein of unknown function DUF63 family (IPR002749). (277 aa)    
Predicted Functional Partners:
MCP_0191
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF95, transmembrane family (IPR002798).
 
   
 0.864
MCP_0192
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF95, transmembrane family (IPR002798).
 
   
 0.748
egsA
Glycerol-1-phosphate dehydrogenase [NAD(P)]; Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1- phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea. Belongs to the glycerol-1-phosphate dehydrogenase family.
     
 0.674
MCP_2990
Single-stranded DNA-binding replication protein.
  
     0.605
MCP_1538
Conserved hypothetical protein.
 
     0.583
MCP_2661
Archaeal histone.
 
     0.583
MCP_2297
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF1621 family (IPR012426).
  
     0.573
MCP_1328
Putative bacterial type II secretion system protein.
  
     0.572
MCP_0137
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF460 family (IPR007408).
  
     0.570
MCP_0724
Putative DNA-directed RNA polymerase subunit F.
 
     0.559
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.