STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atpC-1A-type ATP synthase subunit C; Produces ATP from ADP in the presence of a proton gradient across the membrane. (354 aa)    
Predicted Functional Partners:
atpD-1
A-type ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
atpB-1
A-type ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit.
 
 0.999
atpA-1
A-type ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
 
 0.999
atpF-1
A-type ATP synthase subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
atpE-1
A-type ATP synthase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
atpK-1
A-type ATP synthase subunit K.
 
 0.999
atpI-1
A-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.999
atpH
A-type ATP synthase subunit H.
   
 0.994
atpK-2
A-type ATP synthase subunit K.
 
 0.990
atpI-2
A-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.990
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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