Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MCP_0358 | MCP_0359 | MCP_0358 | MCP_0359 | Peptidase M48, Ste24p family protein. | Hypothetical protein. | 0.532 |
MCP_0358 | MCP_0360 | MCP_0358 | MCP_0360 | Peptidase M48, Ste24p family protein. | Hypothetical protein; Contains at least one PBS lyase HEAT-like repeat (IPR004155). | 0.473 |
MCP_0358 | MCP_0632 | MCP_0358 | MCP_0632 | Peptidase M48, Ste24p family protein. | Conserved hypothetical protein; Contains one Amino acid-binding ACT domain (IPR002912). | 0.678 |
MCP_0358 | MCP_0989 | MCP_0358 | MCP_0989 | Peptidase M48, Ste24p family protein. | Glutamate synthase. | 0.471 |
MCP_0358 | MCP_2148 | MCP_0358 | MCP_2148 | Peptidase M48, Ste24p family protein. | Conserved hypothetical protein; Belongs to the Auxin efflux carrier family (IPR004776). | 0.753 |
MCP_0358 | MCP_2676 | MCP_0358 | MCP_2676 | Peptidase M48, Ste24p family protein. | Conserved hypothetical protein; Belongs to the GHMP kinase-like, archaeal family (IPR012043). | 0.671 |
MCP_0358 | alaS | MCP_0358 | MCP_2964 | Peptidase M48, Ste24p family protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.598 |
MCP_0358 | metE | MCP_0358 | MCP_1359 | Peptidase M48, Ste24p family protein. | Putative methylcobalamin:homocysteine methyltransferase. | 0.449 |
MCP_0358 | pycA | MCP_0358 | MCP_0184 | Peptidase M48, Ste24p family protein. | Putative pyruvate carboxylase subunit A. | 0.602 |
MCP_0358 | pyk | MCP_0358 | MCP_1524 | Peptidase M48, Ste24p family protein. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.678 |
MCP_0359 | MCP_0358 | MCP_0359 | MCP_0358 | Hypothetical protein. | Peptidase M48, Ste24p family protein. | 0.532 |
MCP_0359 | MCP_0360 | MCP_0359 | MCP_0360 | Hypothetical protein. | Hypothetical protein; Contains at least one PBS lyase HEAT-like repeat (IPR004155). | 0.671 |
MCP_0360 | MCP_0358 | MCP_0360 | MCP_0358 | Hypothetical protein; Contains at least one PBS lyase HEAT-like repeat (IPR004155). | Peptidase M48, Ste24p family protein. | 0.473 |
MCP_0360 | MCP_0359 | MCP_0360 | MCP_0359 | Hypothetical protein; Contains at least one PBS lyase HEAT-like repeat (IPR004155). | Hypothetical protein. | 0.671 |
MCP_0632 | MCP_0358 | MCP_0632 | MCP_0358 | Conserved hypothetical protein; Contains one Amino acid-binding ACT domain (IPR002912). | Peptidase M48, Ste24p family protein. | 0.678 |
MCP_0632 | alaS | MCP_0632 | MCP_2964 | Conserved hypothetical protein; Contains one Amino acid-binding ACT domain (IPR002912). | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.664 |
MCP_0989 | MCP_0358 | MCP_0989 | MCP_0358 | Glutamate synthase. | Peptidase M48, Ste24p family protein. | 0.471 |
MCP_0989 | pycA | MCP_0989 | MCP_0184 | Glutamate synthase. | Putative pyruvate carboxylase subunit A. | 0.904 |
MCP_2148 | MCP_0358 | MCP_2148 | MCP_0358 | Conserved hypothetical protein; Belongs to the Auxin efflux carrier family (IPR004776). | Peptidase M48, Ste24p family protein. | 0.753 |
MCP_2676 | MCP_0358 | MCP_2676 | MCP_0358 | Conserved hypothetical protein; Belongs to the GHMP kinase-like, archaeal family (IPR012043). | Peptidase M48, Ste24p family protein. | 0.671 |
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