STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_0360Hypothetical protein; Contains at least one PBS lyase HEAT-like repeat (IPR004155). (163 aa)    
Predicted Functional Partners:
MCP_1142
Hypothetical protein; Contains at least one PBS lyase HEAT-like repeat (IPR004155).
 
     0.707
MCP_2755
Hypothetical protein; Contains at least one PBS lyase HEAT-like repeatrepeat (IPR004155).
 
     0.706
MCP_2031
Conserved hypothetical protein; Contains at least PBS lyase HEAT-like repeat (IPR004155).
 
     0.704
MCP_2922
Hypothetical protein; Contains at least one PBS lyase HEAT-like repeat (IPR004155).
 
     0.699
MCP_1681
Hypothetical protein; Contains at least two PBS lyase HEAT-like repeats (IPR004155).
 
     0.698
MCP_2391
Hypothetical protein; Contains two PBS lyase HEAT-like repeats (IPR004155).
  
     0.690
MCP_1210
Conserved hypothetical protein; Contains the PBS lyase HEAT-like repeat (IPR004155).
  
     0.688
MCP_0359
Hypothetical protein.
       0.671
MCP_1395
Hypothetical protein.
 
     0.658
nifH-1
Putative nitrogenase iron protein.
       0.516
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.