Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
MCP_0411ABC transporter ATP binding protein. (249 aa)    
Predicted Functional Partners:
MCP_0410
Putative ABC transporter; Belongs to the SufBD family (IPR000825).
 
 0.999
csd
Putative cysteine desulfurase.
  
 0.994
MCP_0409
Putative iron sulfur cluster assembly protein.
  
  
 0.947
MCP_0101
Conserved hypothetical protein; Belongs to the HesB/YadR/YfhF family (IPR000361).
  
 
 0.734
iscS-1
Probable cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.
  
  
 0.504
iscS-2
Probable cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.
  
  
 0.504
MCP_0212
Ferrous iron transport protein B.
     
 0.499
argD
Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
       0.493
MCP_0989
Glutamate synthase.
     
 0.465
MCP_0111
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF167 family (IPR003746); Belongs to the Conserved hypothetical protein 251 family (IPR005228).
       0.413
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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