STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acsAacetyl-CoA synthetase. (570 aa)    
Predicted Functional Partners:
MCP_2918
acetyl-CoA synthetase.
    
 0.977
MCP_2748
acyl-CoA C-acyltransferases.
  
 
 0.970
acdB
acetyl-CoA synthetase beta subunit.
    
 0.964
pycA
Putative pyruvate carboxylase subunit A.
  
 0.960
MCP_0233
Similar to peptide synthetase AdpD in Anabaena circinalis 90 (Q9K5L9).
 
0.949
pdhC
Pyruvate dehydrogenase E2 component.
  
 
 0.926
MCP_1257
Similar to Ketoisovalerate oxidoreductase alpha chain VorA in Pyrococcus furiosus (Q51801).
  
 
 0.925
MCP_2613
Similar to Pyruvate synthase alpha chain PorA in Pyrococcus furiosus (Q51804).
  
 
 0.925
MCP_1258
Pyruvate synthase beta chain; Similar to Ketoisovalerate oxidoreductase beta VorB in Pyrococcus furiosus (Q51802).
  
 
 0.923
MCP_2614
Similar to Pyruvate synthase beta chain PorB in Pyrococcus furiosus (Q51805).
  
 
 0.923
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.