STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_0446Putative pyruvate carboxyltransferase. (464 aa)    
Predicted Functional Partners:
pycA
Putative pyruvate carboxylase subunit A.
  
 
 0.936
MCP_1257
Similar to Ketoisovalerate oxidoreductase alpha chain VorA in Pyrococcus furiosus (Q51801).
  
 
 0.918
pdhC
Pyruvate dehydrogenase E2 component.
    
 0.918
MCP_2613
Similar to Pyruvate synthase alpha chain PorA in Pyrococcus furiosus (Q51804).
  
 
 0.918
MCP_1258
Pyruvate synthase beta chain; Similar to Ketoisovalerate oxidoreductase beta VorB in Pyrococcus furiosus (Q51802).
  
 
 0.917
MCP_2614
Similar to Pyruvate synthase beta chain PorB in Pyrococcus furiosus (Q51805).
  
 
 0.917
MCP_1256
Pyruvate/ketoisovalerate oxidoreductase common subunit gamma; Bifunctional protein.
  
 
 0.912
MCP_2611
Pyruvate/ketoisovalerate oxidoreductase common subunit gamma; Bifunctional protein.
  
 
 0.912
pycB
Pyruvate carboxylase subunit B.
    
 0.908
MCP_1255
Pyruvate synthase delta chain; Similar to Ketoisovalerate oxidoreductase delta subunit VorB in Pyrococcus furiosus (Q51800).
    
 0.902
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.