STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acdAacetyl-CoA synthetase alpha subunit. (458 aa)    
Predicted Functional Partners:
acdB
acetyl-CoA synthetase beta subunit.
 
 0.999
MCP_2918
acetyl-CoA synthetase.
 
 
0.980
MCP_2748
acyl-CoA C-acyltransferases.
  
 
 0.928
acsA
acetyl-CoA synthetase.
   
 0.920
MCP_0935
Putative acyl-CoA synthetase.
   
 0.920
pdhC
Pyruvate dehydrogenase E2 component.
    
 0.904
aksA
Homocitrate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
    
 0.903
MCP_2808
Putative 2-isopropylmalate synthase.
    
 0.903
MCP_2687
Putative acylphosphatase.
    
 0.902
MCP_0060
Putative thymidine phosphorylase; Catalyzes the conversion of AMP and phosphate to adenine and ribose 1,5-bisphosphate (R15P). Exhibits phosphorylase activity toward CMP and UMP in addition to AMP. Functions in an archaeal AMP degradation pathway, together with R15P isomerase and RubisCO. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily.
     
 0.874
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.