STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_0463Conserved hypothetical protein; Contains one Alpha/beta hydrolase fold-1 domain (IPR000073). (266 aa)    
Predicted Functional Partners:
MCP_1877
Putative phosphoesterase; Belongs to the Protein of unknown function UPF0025 family (IPR000979).
 
 
 0.618
MCP_1774
Hypothetical protein; Contains at least one Ankyrin repeatrepeat (IPR002110); Contains at least one PBS lyase HEAT-like repeat (IPR004155).
  
 0.589
MCP_0933
Hypothetical protein; Contains at least one Ankyrin repeat (IPR002110).
  
 0.588
MCP_2176
Conserved hypothetical protein.
   
 0.575
MCP_0462
Putative methyltransferase.
       0.572
MCP_2598
NADH oxidase.
  
 
 0.568
MCP_0073
Conserved hypothetical protein; Contains one Metallophosphoesterase domain (IPR004843).
   
 0.565
MCP_0934
Conserved hypothetical protein; Contains one Metallophosphoesterase domain (IPR004843).
   
 0.565
MCP_1878
Putative phosphoesterase; Belongs to the Protein of unknown function UPF0025 family (IPR000979).
   
 0.565
MCP_1667
Conserved hypothetical protein.
 
 
 0.417
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.