Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MCP_0490AsnC/Lrp family transcriptional regulator. (173 aa)    
Predicted Functional Partners:
MCP_0489
Putative aspartate aminotransferase.
 
   
 0.966
MCP_1920
Putative AsnC/Lrp family transcriptional regulator.
   
 
 0.607
rps8e
30S ribosomal protein S8e.
       0.582
cdc6-1
Cell division control protein 6 homolog; Involved in regulation of DNA replication.
       0.536
MCP_0491
Archaeal histone.
     
 0.535
MCP_0488
Putative small-conductance mechanosensitive channel.
       0.494
MCP_1343
AsnC/Lrp family transcriptional regulator.
  
     0.425
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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