STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_0525Conserved hypothetical protein; Contains one Dinitrogenase iron-molybdenum cofactor biosynthesis domain (IPR003731). (113 aa)    
Predicted Functional Partners:
MCP_0527
Conserved hypothetical protein; Contains one Cobyrinic acid a,c-diamide synthase domain (IPR002586); Contains two 4Fe-4S ferredoxin, iron-sulfur binding domains (IPR001450).
 
  
 0.880
MCP_0526
Conserved hypothetical protein; Contains one Cobyrinic acid a,c-diamide synthase domain (IPR002586); Contains two 4Fe-4S ferredoxin, iron-sulfur binding domains (IPR001450).
 
  
 0.871
MCP_0519
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF134 family (IPR002852).
 
  
 0.755
MCP_0528
Conserved hypothetical protein; Contains one Dinitrogenase iron-molybdenum cofactor biosynthesis domain (IPR003731).
 
     0.753
MCP_0521
Nucleotide-binding protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
 
  
 0.726
MCP_0520
Conserved hypothetical protein; Contains one Dinitrogenase iron-molybdenum cofactor biosynthesis domain (IPR003731).
 
     0.657
atw-1
Putative methylcoenzyme M reductase system component A2.
       0.572
MCP_0523
[NiFe]-hydrogenase large subunit; Similar to Ech hydrogenase, subunit EchE in Methanosarcina barkeri (O59656).
       0.572
MCP_0524
Hypothetical protein.
       0.572
mptH
Putative dihydropteroate synthase.
 
     0.556
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.