Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MCP_0529Hypothetical protein. (37 aa)    
Predicted Functional Partners:
MCP_1086
Putative truncated cobalamin biosynthesis protein.
  
    0.784
MCP_1087
Conserved hypothetical protein.
  
    0.784
MCP_0526
Conserved hypothetical protein; Contains one Cobyrinic acid a,c-diamide synthase domain (IPR002586); Contains two 4Fe-4S ferredoxin, iron-sulfur binding domains (IPR001450).
     
 0.597
MCP_0527
Conserved hypothetical protein; Contains one Cobyrinic acid a,c-diamide synthase domain (IPR002586); Contains two 4Fe-4S ferredoxin, iron-sulfur binding domains (IPR001450).
     
 0.597
MCP_0528
Conserved hypothetical protein; Contains one Dinitrogenase iron-molybdenum cofactor biosynthesis domain (IPR003731).
       0.590
MCP_0530
Conserved hypothetical protein; Contains one Dinitrogenase iron-molybdenum cofactor biosynthesis domain (IPR003731).
       0.503
MCP_0531
Hypothetical protein.
       0.470
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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