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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_0535Putative histidine kinase; Contains one PAS domain (IPR000014); Contains one PAS-associated, C-terminal domain (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one PAC motif repeat (IPR001610). (477 aa)    
Predicted Functional Partners:
MCP_0536
Putative histidine kinase; Contains one ATP-binding region, ATPase-like domain (IPR003594).
 
    
0.790
MCP_1768
Putative signaling protein; Contains two PAS domains (IPR000014); Contains two PAS-associated, C-terminal domains (IPR000700).
    
0.710
MCP_2581
Putative response regulator.
 
     0.660
MCP_0475
Putative response regulator.
  
     0.513
MCP_1650
Putative response regulator.
 
     0.511
MCP_2616
Putative histidine kinase; Contains at least one GAF domain (IPR003018); Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).
   
0.472
MCP_1444
Putative MCP methyltransferase.
     0.454
MCP_2190
Putative signaling protein; Contains seven PAS domains (IPR000014); Contains five PAS-associated, C-terminal domains (IPR000700).; Contains five PAC motif repeats (IPR001610).
     0.423
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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