STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_0572Hypothetical protein; Contains at least one PT repeat (IPR006970). (481 aa)    
Predicted Functional Partners:
MCP_0571
Calcium/proton exchanger.
 
     0.588
hisI
phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.
       0.559
MCP_0983
Conserved hypothetical protein; Contains one Dual specificity protein phosphatase domain (IPR000340).
  
     0.504
MCP_0574
Conserved hypothetical protein; Contains one PilT protein, N-terminal domain (IPR002716); Contains one Nucleotide binding protein, PINc domain (IPR006596).; Contains one Bacterial type II secretion system protein E domain (IPR001482).; Contains one KH, type 1 domain (IPR004088).
       0.470
MCP_1825
Hypothetical protein; Contains two Na-Ca exchanger/integrin-beta4 domains (IPR003644).
  
     0.444
MCP_0366
Conserved hypothetical protein.
  
     0.442
MCP_0015
DNA-binding protein; Belongs to the PDCD5 family.
  
     0.439
MCP_0569
Conserved hypothetical protein.
       0.434
htpX-1
Probable protease HtpX homolog; Belongs to the peptidase M48B family.
       0.434
MCP_0775
Hypothetical protein.
  
     0.432
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.