STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_0588Putative nitrogen regulatory protein P-II; Belongs to the P(II) protein family. (109 aa)    
Predicted Functional Partners:
MCP_0587
Ammonium transporter.
  
 
 0.983
MCP_0585
Ammonium transporter.
  
 
 0.959
MCP_0586
Putative nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 
  
 
0.941
MCP_0431
Putative nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
  
  
 
0.901
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
   
 
 0.894
MCP_2698
Protein kinase; Contains at least one Tetratricopeptide region domain (IPR013026); Contains at least three Tetratricopeptide TPR_1 repeats (IPR001440).; Contains at least five Tetratricopeptide TPR_2repeats (IPR013105).
   
 
 0.673
MCP_0825
Conserved hypothetical protein; Contains one Tetratricopeptide TPR_2 repeat (IPR013105).
   
 
 0.635
MCP_0117
Hypothetical protein.
   
 
 0.634
MCP_0178
Hypothetical protein; Contains at least one Tetratricopeptide region domain (IPR013026); Contains at least four Tetratricopeptide TPR_1 repeats (IPR001440).; Contains at least three Tetratricopeptide TPR_2 repeats (IPR013105).
   
 
 0.634
MCP_0443
Hypothetical protein; Contains at least Tetratricopeptide region domains (IPR013026); Contains at least three Tetratricopeptide TPR_1 repeats (IPR001440).; Contains for Tetratricopeptide TPR_2repeats (IPR013105).
   
 
 0.634
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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